BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H02LP1|AL429469
(715 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig849 1388 0.0
>3x_Contig849
Length = 3479
Score = 1388 bits (697), Expect = 0.0
Identities = 708/715 (99%)
Strand = Plus / Minus
Query: 1 atccaccattatcggtggtttcttgtataacttgtacgaacaacttggttgggatgtcac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1613 atccaccattatcggtggtttcttgtctaacttgtacgaacaacttggttgggatgtcac 1554
Query: 61 tagaataaattacttgggtgawtagggtaaacaatttggtgtcttggccgttggtttcga 120
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 1553 tagaataaattacttgggtgattggggtaaacaatttggtgtcttggccgttggtttcga 1494
Query: 121 aagawatggtgatgaagaagccttgagaaacgatccaattaaccatttgttcgaagtgta 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 aagatatggtgatgaagaagccttgagaaacgatccaattaaccatttgttcgaagtgta 1434
Query: 181 cgtccgtatcaacaaggatatcgaaaatgagggtgacaccttatcagaagaagaatccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 cgtccgtatcaacaaggatatcgaaaatgagggtgacaccttatcagaagaagaatccac 1374
Query: 241 tgatggtaaggcccgtagttatttcaagaagatggaagatggtgatccagaagctttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 tgatggtaaggcccgtagttatttcaagaagatggaagatggtgatccagaagctttgaa 1314
Query: 301 gatatggaaaagattccgtgagttatccattgaaaaatacatcaaaacctatgctcgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1313 gatatggaaaagattccgtgagttatccattgaaaaatacatcaaaacctatgctcgttt 1254
Query: 361 gaacatcaagtacgatgtgtactctggtgaatctcaagtttccaaagaacaaatggacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 gaacatcaagtacgatgtgtactctggtgaatctcaagtttccaaagaacaaatggacaa 1194
Query: 421 ggcaatgaggatgtttgaggataagaatttgacccatgaggatagaggtgcaactttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 ggcaatgaggatgtttgaggataagaatttgacccatgaggatagaggtgcaactttgat 1134
Query: 481 cgatttgaccaaatttaacaaaaagttgggtaagaccatcgtccaaaaatctgatggtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 cgatttgaccaaatttaacaaaaagttgggtaagaccatcgtccaaaaatctgatggtac 1074
Query: 541 cacactatatttmacccgtgacgttggtgctgctatggatcgttacgagaaatatcactt 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 cacactatatttaacccgtgacgttggtgctgctatggatcgttacgagaaatatcactt 1014
Query: 601 tgaccagatgatctacgtgattgcstgtcaacaagatttgcatgtagctcaattcttcga 660
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1013 tgaccagatgatctacgtgattgcctgtcaacaagatttgcatgtagctcaattcttcga 954
Query: 661 aattctaaagcaattgggtttcgaatgggscaacagactacaacacgttaacttc 715
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 953 aattctaaagcaattgggtttcgaatgggccaacagactacaacacgttaacttc 899
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5997
Number of Sequences: 1807
Number of extensions: 5997
Number of successful extensions: 130
Number of sequences better than 1.0e-20: 1
length of query: 715
length of database: 10,358,551
effective HSP length: 16
effective length of query: 699
effective length of database: 10,329,639
effective search space: 7220417661
effective search space used: 7220417661
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)